# Flagship Pioneering jobs and careers

> 94 open roles at Flagship Pioneering as of November 12, 2026. Source: https://www.thejobsmap.com/company/flagship-pioneering

Flagship Pioneering invents and builds platform companies, each with the potential for multiple products that transform human health, sustainability and beyond. Since its launch in 2000, Flagship has originated more than 100 companies. Many of these companies have addressed humanity’s most urgent challenges: vaccinating billions of people against COVID-19, curing intractable diseases, improving human health, preempting illness, and feeding the world by improving the resiliency and sustainability of agriculture. Flagship has been recognized twice on FORTUNE’s “Change the World” list, an annual ranking of companies that have made a positive social and environmental impact through...

## Key facts

| | |
|---|---|
| Open roles | 94 |
| Posted in the last 7 days | 12 |
| Cities hiring | 5 |
| Average listed base pay (USD/yr) | $152k |
| Highest listed base pay (USD/yr) | $413k |
| Headquarters | Cambridge |
| Founded | 2000 |
| Industries | Biotechnology |
| Website | https://flagshippioneering.com |

## Where they are hiring

- Cambridge: 84 open roles
- Watertown: 5 open roles
- Somerville: 3 open roles
- Boulder: 1 open roles

## Newest open roles

- [(Senior) Machine Learning Scientist](https://www.thejobsmap.com/job/54c5b852-8923-4141-bb1f-9a9e2e0dacc9), Watertown, MA USA ($132k to $259k)
- [Executive Assistant and Workplace Experience Coordinator](https://www.thejobsmap.com/job/bb871675-bf2c-4d1b-bd73-37bc9fbd46c4), Cambridge, MA USA ($88k to $120k)
- [Lead, APEX Strategy and Operations](https://www.thejobsmap.com/job/dabe2175-94ed-49b5-8d0b-053e6880c033), Cambridge, MA USA ($128k to $204k)
- [Senior Engineer, Data Infrastructure](https://www.thejobsmap.com/job/ac716786-4143-45c5-8dd3-8a513feae4df), Cambridge, UK
- [Senior Analyst, Drug Development & Clinical Strategy](https://www.thejobsmap.com/job/4ca63968-7c73-4291-ac7a-508e4f4197dd), Cambridge, UK
- [Director, Modeling and Simulation](https://www.thejobsmap.com/job/400e3c23-ebdc-4ff4-bf6c-420e8ac0f045), Cambridge, MA USA ($172k to $237k)
- [Senior Research Associate / Associate Scientist, Nonclinical](https://www.thejobsmap.com/job/637cb0ee-bb10-4374-8ef2-adea5ee0aa23), Cambridge, MA USA ($81k to $127k)
- [Senior Analog/Mixed-Signal Hardware Engineer, Single-Molecule Sensing Instrumentation](https://www.thejobsmap.com/job/0bd8b519-8b9c-48c2-a7ed-920ddbf802aa), Cambridge, MA USA ($108k to $176k)
- [FL114: Senior Research Associate, Genomics](https://www.thejobsmap.com/job/9fed07d7-6f78-4d07-814c-9daf5cb97004), Cambridge, MA USA ($81k to $107k)
- [FL114: Scientist, Genomics](https://www.thejobsmap.com/job/acd4e0d4-b050-4d0e-a7de-a578643c7905), Cambridge, MA USA ($100k to $127k)
- [Principal Scientist, Structural Biology / Protein Biophysics](https://www.thejobsmap.com/job/bd629125-541d-445e-85f7-103ca3c03b55), Cambridge, MA USA ($163k to $215k)
- [Origination Associate](https://www.thejobsmap.com/job/f37644f8-8f81-40e2-aac4-27bb6b914e67), Cambridge, MA USA
- [Senior ML Engineer](https://www.thejobsmap.com/job/56259cd1-e447-4fdc-b3c0-83a71a45266d), Cambridge, MA USA
- [Sr. Scientist, Protein & Cell Sciences](https://www.thejobsmap.com/job/f73653e6-faa2-421c-b7c8-462f005c598c), Somerville, MA USA ($126k to $182k)
- [Senior Director, Platform Experience](https://www.thejobsmap.com/job/80c6015b-6b09-4590-8ad8-ce0b1201444e), Cambridge, MA USA ($223k to $294k)
- [Senior Automation Engineer, Platform Biology](https://www.thejobsmap.com/job/b64f98af-98e3-46d0-afdb-0425eaac40d9), Cambridge, MA USA ($108k to $171k)
- [Associate Director, Accounting](https://www.thejobsmap.com/job/11a8e45b-b7e9-4605-b047-915fc8a5e49d), Watertown, MA USA ($157k to $198k)
- [Research Associate II/Senior Research Associate, LNP Production](https://www.thejobsmap.com/job/e37ece08-d236-478b-a69c-9fceff4d4d45), Cambridge, MA USA ($74k to $107k)
- [Senior Scientist, LNP Formulations](https://www.thejobsmap.com/job/9146ff43-5218-482c-910a-2bc95d0e74f2), Cambridge, MA USA ($126k to $182k)
- [Vice President, Engineering](https://www.thejobsmap.com/job/66f50efe-dc00-4ede-b569-a60b81dcaff6), Cambridge, MA USA ($313k to $400k)
- [Principal Software Engineer - Agentic Platform](https://www.thejobsmap.com/job/e5ea8fba-cb07-4ca2-a9cc-394984229df9), Cambridge, MA USA ($188k to $258k)
- [Senior Analyst, Drug Development & Clinical Strategy](https://www.thejobsmap.com/job/0ad901af-2324-43ab-86b3-a72cbdab9982), Cambridge, MA USA ($112k to $155k)
- [Senior Machine Learning Scientist](https://www.thejobsmap.com/job/607436ee-a549-4ba2-bf0d-3d7bb47c65e3), Cambridge, UK
- [Principal AI Scientist, Autonomous Discovery](https://www.thejobsmap.com/job/7f8d6e3e-674a-4a79-a49f-540ff3b98fc7), Cambridge, MA USA ($208k to $286k)
- [Principal Scientist, Machine Learning](https://www.thejobsmap.com/job/b62623ad-35cd-4d69-9f95-b3433c4a2d6e), Cambridge, MA USA ($208k to $286k)
- All 94 roles: https://www.thejobsmap.com/company/flagship-pioneering#jobs

## Leadership

- Noubar Afeyan, Founder & CEO
- Chuck Carelli, CFO & Executive Partner
- Doug Cole, Managing Partner
- Alec Reynolds, Chief Operating Officer, Pioneering Medicines
- Amanda Kay, Senior Partner And Chief Business Development Officer
- Frederic Robert-Michon, Chief Information Officer
- Joy Right, VP, Talent Acquisition & Executive Search
- Mickey Atwal, Chief Data & AI Officer

## Common questions

### Is Flagship Pioneering hiring right now?

Yes. Flagship Pioneering has 94 open roles listed as of November 12, 2026.

### Where is Flagship Pioneering hiring?

Flagship Pioneering is hiring in 5 cities. The most open roles are in Cambridge (84), Watertown (5) and Somerville (3).

### How much does Flagship Pioneering pay?

Across open roles that list pay, the average advertised base salary at Flagship Pioneering is $152k a year, and the highest is $413k.

### Where is Flagship Pioneering headquartered?

Flagship Pioneering is headquartered in Cambridge and was founded in 2000.

### Who leads Flagship Pioneering?

Noubar Afeyan, Founder & CEO, is at the top of Flagship Pioneering's org chart.

### How do I apply for a job at Flagship Pioneering?

Pick a role on Flagship Pioneering's TheJobsMap page and select Apply. Every listing links to the original posting on Flagship Pioneering's own careers site, so you apply directly with the employer.