Flagship Pioneering jobs and careers
Cambridge
As of November 12, 2026, Flagship Pioneering has 94 open roles in 5 cities.
About Flagship Pioneering
Flagship Pioneering invents and builds platform companies, each with the potential for multiple products that transform human health, sustainability and beyond. Since its launch in 2000, Flagship has originated more than 100 companies. Many of these companies have addressed humanity’s most urgent challenges: vaccinating billions of people against COVID-19, curing intractable diseases, improving human health, preempting illness, and feeding the world by improving the resiliency and sustainability of agriculture. Flagship has been recognized twice on FORTUNE’s “Change the World” list, an annual ranking of companies that have made a positive social and environmental impact through...
- Founded
- 2000
- Headquarters
- Cambridge
- Hiring in
- 5 cities
Leadership
The top of Flagship Pioneering's org chart, with how many people report into each leader.
Noubar Afeyan
Founder & CEO
361 reports
Chuck Carelli
CFO & Executive Partner
92 reports
Doug Cole
Managing Partner
78 reports
Alec Reynolds
Chief Operating Officer, Pioneering Medicines
34 reports
Amanda Kay
Senior Partner And Chief Business Development Officer
33 reports
Frederic Robert-Michon
Chief Information Officer
21 reports
Joy Right
VP, Talent Acquisition & Executive Search
16 reports
Mickey Atwal
Chief Data & AI Officer
12 reports
Tyler Durham
SVP, Head of Talent, Leadership and Development, Employee Experience, and Insights
6 reports
Open roles at Flagship Pioneering 94
- (Senior) Machine Learning Scientist$132k to $259kWatertown, MA USA2 days ago
- Executive Assistant and Workplace Experience Coordinator$88k to $120kCambridge, MA USA2 days ago
- Lead, APEX Strategy and Operations$128k to $204kCambridge, MA USA2 days ago
- Senior Engineer, Data InfrastructureCambridge, UK2 days ago
- Senior Analyst, Drug Development & Clinical StrategyCambridge, UK3 days ago
- Director, Modeling and Simulation$172k to $237kCambridge, MA USA5 days ago
- Senior Research Associate / Associate Scientist, Nonclinical$81k to $127kCambridge, MA USA6 days ago
- Senior Analog/Mixed-Signal Hardware Engineer, Single-Molecule Sensing Instrumentation$108k to $176kCambridge, MA USA6 days ago
- FL114: Senior Research Associate, Genomics$81k to $107kCambridge, MA USA7 days ago
- FL114: Scientist, Genomics$100k to $127kCambridge, MA USA7 days ago
- Principal Scientist, Structural Biology / Protein Biophysics$163k to $215kCambridge, MA USA7 days ago
- Origination AssociateCambridge, MA USA7 days ago
- Senior ML EngineerCambridge, MA USA7 days ago
- Sr. Scientist, Protein & Cell Sciences$126k to $182kSomerville, MA USA7 days ago
- Senior Director, Platform Experience$223k to $294kCambridge, MA USA7 days ago
- Senior Automation Engineer, Platform Biology$108k to $171kCambridge, MA USA8 days ago
- Associate Director, Accounting$157k to $198kWatertown, MA USA8 days ago
- Research Associate II/Senior Research Associate, LNP Production$74k to $107kCambridge, MA USA8 days ago
- Senior Scientist, LNP Formulations$126k to $182kCambridge, MA USA8 days ago
- Vice President, Engineering$313k to $400kCambridge, MA USA8 days ago
- Principal Software Engineer - Agentic Platform$188k to $258kCambridge, MA USA8 days ago
- Senior Analyst, Drug Development & Clinical Strategy$112k to $155kCambridge, MA USA8 days ago
- Senior Machine Learning ScientistCambridge, UK8 days ago
- Principal AI Scientist, Autonomous Discovery$208k to $286kCambridge, MA USA8 days ago
- Principal Scientist, Machine Learning$208k to $286kCambridge, MA USA8 days ago
- Principal Scientist, Machine Learning - Biomolecules$208k to $286kCambridge, MA USA8 days ago
- Director, Drug Development Project Management & Pipeline StrategyCambridge, MA USA8 days ago
- Principal Scientist, Machine Learning - Multimodal Biological Reasoning$216k to $297kCambridge, MA USA8 days ago
- (Senior) Scientist - Translational Modeling & Decision Science$115k to $205kCambridge, MA USA8 days ago
- Director, Drug Development Project Management & Pipeline StrategyCambridge, UK8 days ago
- Scientist I, Biochemistry & Lead Discovery$100k to $127kCambridge, MA USA8 days ago
- Flagship Pioneering ML Internship$84k to $108kCambridge, MA USA9 days ago
- Principal Data Engineer$179k to $236kCambridge, MA USA10 days ago
- Senior IP Paralegal$108k to $149kCambridge, MA USA12 days ago
- Sr. Director, Clinical Operations$213k to $280kSomerville, MA USA12 days ago
- Plant Care Associate (Contract)$67k to $75kDurham, NC USA12 days ago
- Scientist, Machine Learning (Human Physiology)$136k to $212kCambridge, MA USA2 weeks ago
- Scientist, In Vivo Pharmacology$100k to $143kCambridge, MA USA2 weeks ago
- Associate Scientist, Bioanalytical Assays$96k to $127kCambridge, MA USA2 weeks ago
- Director/Senior Director, Computational Chemistry$176k to $294kCambridge, MA USA2 weeks ago
- Senior Manager, Visual Design$128k to $176kCambridge, MA USA2 weeks ago
- Senior Director, Strategy and Operations$220k to $270kCambridge, MA USA2 weeks ago
- Lead Data Engineer$128k to $176kCambridge, MA USA2 weeks ago
- Senior Director, LNP Formulation & Process Development$213k to $281kCambridge, MA USA3 weeks ago
- Associate Director, LNP Manufacturing$154k to $204kCambridge, MA USA3 weeks ago
- Senior Associate, Origination - Agriculture and Sustainability$155k to $210kCambridge, MA USA3 weeks ago
- Senior / Principal Data Infrastructure Engineer$165k to $209kCambridge, MA USA3 weeks ago
- Senior Software Engineer (Backend)$108k to $186kCambridge, MA USA3 weeks ago
- Lead Engineer, Microsoft 365 and Identity Automation$128k to $176kCambridge, MA USA3 weeks ago
- Commercial & Go To Market Lead$150k to $200kCambridge, MA USA3 weeks ago
- Senior Strategic Transactions Lead, APEX$176k to $346kCambridge, MA USA3 weeks ago
- Director, Legal Compliance$172k to $237kCambridge, MA USA3 weeks ago
- Lead Bioinformatics Engineer$128k to $176kCambridge, MA USA3 weeks ago
- Director, Scientific Cloud Engineering$172k to $237kCambridge, MA USA3 weeks ago
- 2027 Flagship Pioneering Fellowship$96k to $108kCambridge, MA USA3 weeks ago
- Associate Director/Director International Accounting and Government Compliance$148k to $237kCambridge, MA USA3 weeks ago
- Contracts Attorney$138k to $237kCambridge, MA USA3 weeks ago
- Director/Senior Director, Regulatory Counsel$172k to $281kCambridge, MA USA3 weeks ago
- Operating Principal, Summit PBU$220k to $270kCambridge, MA USA3 weeks ago
- Product Concept Innovation Associate$140k to $170kCambridge, MA USA3 weeks ago
- Senior Associate, Origination$155k to $190kCambridge, MA USA3 weeks ago
- Talent Operations Specialist$76k to $104kCambridge, MA USA3 weeks ago
- Transactions Counsel, APEX$128k to $235kCambridge, MA USA3 weeks ago
- Vice President, Business Development$280k to $331kCambridge, MA USA3 weeks ago
- Strategic Transactions Counsel, APEX$176k to $346kCambridge, MA USA3 weeks ago
- Vice President, Human Resources$270k to $320kCambridge, MA USA3 weeks ago
- Senior Manager, Internal Communications$128k to $176kCambridge, MA USA3 weeks ago
- Associate Director Finance$148k to $204kCambridge, MA USA3 weeks ago
- Principal / Senior Principal Scientist, DMPK$179k to $236kCambridge, MA USA4 weeks ago
- Research Associate II, Protein Sciences$74k to $94kCambridge, MA USA4 weeks ago
- Scientist I, In Vitro Pharmacology$100k to $127kWatertown, MA USA5 weeks ago
- Senior Scientist, Bioanalytical Sciences$126k to $182kCambridge, MA USA5 weeks ago
- Director, Research Operations$179k to $236kWatertown, MA USA5 weeks ago
- FL114: Senior Scientist, Therapeutics Engineering$126k to $160kCambridge, MA USA5 weeks ago
- Director, Health Data Science$192k to $253kCambridge, MA USA5 weeks ago
- Research Associate, Protein Production$65k to $94kCambridge, MA USA5 weeks ago
- Principal / Senior Software Engineer$108k to $209kCambridge, MA USA5 weeks ago
- Head of Product$213k to $281kCambridge, MA USA5 weeks ago
- (Senior) Scientist, Machine Learning$180k to $259kCambridge, MA USA5 weeks ago
- Vice President, AI Research and Real-World Evidence$263k to $347kCambridge, MA USA5 weeks ago
- (Senior) Scientist, Translational Biology$126k to $165kCambridge, MA USA5 weeks ago
- Scientist, Computational Sensing$115k to $165kCambridge, MA USA5 weeks ago
- Vice President, Translational Biology$290k to $320kCambridge, MA USA5 weeks ago
- Laboratory Operations Associate$72k to $99kCambridge, MA USA5 weeks ago
- Senior Director / Vice President, Machine Learning (Generative Chemistry)$279k to $413kCambridge, MA USA5 weeks ago
- Director, Pharmacology$180k to $248kSomerville, MA USA5 weeks ago
- Connect with UsCambridge, MA USA5 weeks ago
- Senior Research Associate, In Vivo Pharmacology$81k to $107kWatertown, MA USA5 weeks ago
- (Senior) Scientist, Optical Technologies$100k to $180kCambridge, MA USA5 weeks ago
- Open CallCambridge, MA USA5 weeks ago
- VP, Program Management & Business Operations$250k to $330kCambridge, MA USA5 weeks ago
- Senior / Principal Scientist, Molecular Simulations$146k to $237kCambridge, MA USA5 weeks ago
- Director, Corporate Strategy$183k to $231kCambridge, MA USA5 weeks ago
- Senior Machine Learning Scientist, Climate & Hydrology$127k to $206kBoulder, CO USA5 weeks ago
Flagship Pioneering jobs: common questions
- Is Flagship Pioneering hiring right now?
- Yes. Flagship Pioneering has 94 open roles listed as of November 12, 2026.
- Where is Flagship Pioneering hiring?
- Flagship Pioneering is hiring in 5 cities. The most open roles are in Cambridge (84), Watertown (5) and Somerville (3).
- How much does Flagship Pioneering pay?
- Across open roles that list pay, the average advertised base salary at Flagship Pioneering is $152k a year, and the highest is $413k.
- Where is Flagship Pioneering headquartered?
- Flagship Pioneering is headquartered in Cambridge and was founded in 2000.
- Who leads Flagship Pioneering?
- Noubar Afeyan, Founder & CEO, is at the top of Flagship Pioneering's org chart.
- How do I apply for a job at Flagship Pioneering?
- Pick a role on Flagship Pioneering's TheJobsMap page and select Apply. Every listing links to the original posting on Flagship Pioneering's own careers site, so you apply directly with the employer.